- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | droEre2-99 | mir-1 | cel-miR-1 | 19/21 | scaffold_4845 | - | 51-69 | 3954274-3954359 | 0.99682 | Paralog | 41/61 | 2/166 |
2 | droEre2-99 | mir-1 | cap-miR-1 | 21/22 | scaffold_4845 | - | 49-70 | 3954276-3954357 | 0.996605 | Paralog | 41/61 | 2/166 |
3 | droEre2-98 | mir-79 | ame-miR-79 | 21/21 | scaffold_4845 | + | 48-68 | 19768212-19768284 | 0.889697 | Paralog | 22/28 | 2/45 |
4 | droEre2-98 | mir-79 | der-miR-79 | 22/22 | scaffold_4845 | + | 48-69 | 19768212-19768284 | 0.91431 | Paralog | 22/28 | 2/45 |
5 | droEre2-98 | mir-79 | bmo-miR-79 | 26/26 | scaffold_4845 | + | 44-69 | 19768212-19768284 | 0.944574 | Paralog | 22/28 | 2/45 |
6 | droEre2-98 | mir-79 | cel-miR-79 | 20/22 | scaffold_4845 | + | 47-67 | 19768212-19768284 | 0.889697 | Paralog | 22/28 | 2/45 |
7 | droEre2-96 | mir-306 | der-miR-306 | 22/22 | scaffold_4845 | + | 16-37 | 19768054-19768138 | 0.999991 | Paralog | 12/14 | 2/22 |
8 | droEre2-96 | mir-306 | der-miR-306* | 22/22 | scaffold_4845 | + | 51-72 | 19768056-19768137 | 0.968689 | Paralog | 12/14 | 2/22 |
9 | droEre2-93 | mir-281 | bmo-miR-281 | 21/22 | scaffold_4845 | + | 51-72 | 17736422-17736502 | 0.932642 | Paralog | 25/33 | 3/68 |
10 | droEre2-91 | mir-184 | oan-miR-184 | 20/22 | scaffold_4845 | + | 51-71 | 16598110-16598189 | 0.917436 | Paralog | 40/54 | 2/73 |
11 | droEre2-91 | mir-184 | xtr-miR-184 | 20/22 | scaffold_4845 | + | 52-71 | 16598109-16598190 | 0.893739 | Paralog | 40/54 | 2/73 |
12 | droEre2-91 | mir-184 | der-miR-184 | 22/22 | scaffold_4845 | + | 51-72 | 16598110-16598189 | 0.86387 | Paralog | 40/54 | 2/73 |
13 | droEre2-90 | mir-308 | aga-miR-308 | 21/22 | scaffold_4845 | + | 51-72 | 15739241-15739322 | 0.964109 | Paralog | 13/13 | 2/23 |
14 | droEre2-79 | mir-7 | gga-miR-7 | 22/22 | scaffold_4845 | + | 11-32 | 10640193-10640272 | 0.969203 | Paralog | 46/63 | 2/143 |
15 | droEre2-79 | mir-7 | cap-miR-7 | 23/24 | scaffold_4845 | + | 12-35 | 10640192-10640273 | 0.974454 | Paralog | 46/63 | 2/143 |
16 | droEre2-79 | mir-7 | ssc-miR-7 | 21/21 | scaffold_4845 | + | 11-31 | 10640193-10640272 | 0.976094 | Paralog | 46/63 | 2/143 |
17 | droEre2-79 | mir-7 | der-miR-7 | 23/23 | scaffold_4845 | + | 12-34 | 10640192-10640273 | 0.971287 | Paralog | 46/63 | 2/143 |
18 | droEre2-77 | mir-125 | bfl-miR-125b-as | 22/22 | scaffold_4845 | + | 50-71 | 5799115-5799200 | 0.883443 | Paralog | 45/62 | 2/195 |
19 | droEre2-76 | mir-2 | der-miR-2a | 23/23 | scaffold_4845 | + | 50-72 | 4720197-4720280 | 0.999907 | Paralog | 20/21 | 7/116 |
20 | droEre2-75 | mir-2 | der-miR-2a | 23/23 | scaffold_4845 | + | 50-72 | 4719806-4719883 | 0.999281 | Paralog | 20/21 | 7/116 |
21 | droEre2-71 | mir-92 | mmu-miR-92a | 19/21 | scaffold_4820 | - | 51-69 | 6570023-6570102 | 0.901314 | Paralog | 47/65 | 3/170 |
22 | droEre2-71 | mir-92 | sko-miR-92a | 20/22 | scaffold_4820 | - | 50-69 | 6570024-6570101 | 0.940038 | Paralog | 47/65 | 3/170 |
23 | droEre2-71 | mir-92 | ame-miR-92a | 21/21 | scaffold_4820 | - | 50-70 | 6570024-6570101 | 0.966847 | Paralog | 47/65 | 3/170 |
24 | droEre2-71 | mir-92 | der-miR-92a | 22/22 | scaffold_4820 | - | 49-70 | 6570024-6570101 | 0.939682 | Paralog | 47/65 | 3/170 |
25 | droEre2-7 | mir-210 | aga-miR-210 | 20/21 | scaffold_4690 | + | 51-71 | 8350142-8350226 | 0.988303 | Paralog | 33/43 | 2/62 |
26 | droEre2-7 | mir-210 | lmi-miR-210 | 23/23 | scaffold_4690 | + | 50-72 | 8350142-8350226 | 0.99032 | Paralog | 33/43 | 2/62 |
27 | droEre2-7 | mir-210 | bmo-miR-210 | 20/20 | scaffold_4690 | + | 52-71 | 8350141-8350226 | 0.970001 | Paralog | 33/43 | 2/62 |
28 | droEre2-7 | mir-210 | dre-miR-210 | 20/22 | scaffold_4690 | + | 52-71 | 8350142-8350226 | 0.970263 | Paralog | 33/43 | 2/62 |
29 | droEre2-7 | mir-210 | lmi-miR-210* | 21/22 | scaffold_4690 | + | 13-34 | 8350143-8350224 | 0.946817 | Paralog | 33/43 | 2/62 |
30 | droEre2-64 | mir-219 | odi-miR-219 | 19/21 | scaffold_4784 | - | 11-29 | 16541328-16541407 | 0.995107 | Paralog | 38/52 | 2/89 |
31 | droEre2-64 | mir-219 | dre-miR-219 | 22/22 | scaffold_4784 | - | 12-33 | 16541327-16541408 | 0.99712 | Paralog | 38/52 | 2/89 |
32 | droEre2-64 | mir-219 | spu-miR-219 | 22/23 | scaffold_4784 | - | 12-34 | 16541327-16541408 | 0.996226 | Paralog | 38/52 | 2/89 |
33 | droEre2-64 | mir-219 | hsa-miR-219-5p | 21/21 | scaffold_4784 | - | 12-32 | 16541327-16541408 | 0.99646 | Paralog | 38/52 | 2/89 |
34 | droEre2-58 | mir-33 | mml-miR-33a | 18/19 | scaffold_4784 | + | 12-30 | 19550592-19550671 | 0.960604 | Paralog | 34/54 | 3/96 |
35 | droEre2-58 | mir-33 | der-miR-33 | 21/21 | scaffold_4784 | + | 9-29 | 19550593-19550670 | 0.947684 | Paralog | 34/54 | 3/96 |
36 | droEre2-56 | mir-9 | sko-miR-9 | 21/21 | scaffold_4784 | + | 11-31 | 19355676-19355755 | 0.996916 | Paralog | 41/59 | 5/206 |
37 | droEre2-56 | mir-9 | lmi-miR-9a* | 22/23 | scaffold_4784 | + | 50-72 | 19355675-19355756 | 0.998927 | Paralog | 41/59 | 5/206 |
38 | droEre2-56 | mir-9 | xtr-miR-9 | 22/22 | scaffold_4784 | + | 11-32 | 19355676-19355755 | 0.996892 | Paralog | 41/59 | 5/206 |
39 | droEre2-56 | mir-9 | der-miR-9a | 23/23 | scaffold_4784 | + | 12-34 | 19355675-19355756 | 0.997797 | Paralog | 41/59 | 5/206 |
40 | droEre2-54 | mir-315 | der-miR-315 | 22/22 | scaffold_4784 | + | 10-31 | 18670612-18670690 | 0.997807 | Paralog | 18/21 | 2/35 |
41 | droEre2-54 | mir-315 | sko-miR-315 | 21/21 | scaffold_4784 | + | 10-30 | 18670612-18670690 | 0.998395 | Paralog | 18/21 | 2/35 |
42 | droEre2-54 | mir-315 | cap-miR-315 | 23/23 | scaffold_4784 | + | 11-33 | 18670611-18670691 | 0.996242 | Paralog | 18/21 | 2/35 |
43 | droEre2-52 | mir-276 | bmo-miR-276 | 22/22 | scaffold_4784 | + | 15-36 | 10353138-10353220 | 0.998494 | Paralog | 17/17 | 4/53 |
44 | droEre2-52 | mir-276 | tca-miR-276* | 20/20 | scaffold_4784 | + | 16-35 | 10353138-10353220 | 0.998723 | Paralog | 17/17 | 4/53 |
45 | droEre2-52 | mir-276 | aga-miR-276-5p | 20/20 | scaffold_4784 | + | 15-34 | 10353138-10353220 | 0.999541 | Paralog | 17/17 | 4/53 |
46 | droEre2-52 | mir-276 | der-miR-276a | 22/22 | scaffold_4784 | + | 51-72 | 10353139-10353219 | 0.999225 | Paralog | 17/17 | 4/53 |
47 | droEre2-52 | mir-276 | dme-miR-276* | 23/23 | scaffold_4784 | + | 14-36 | 10353138-10353220 | 0.997322 | Paralog | 17/17 | 4/53 |
48 | droEre2-51 | mir-276 | dme-miR-276* | 23/23 | scaffold_4784 | + | 14-36 | 10306190-10306272 | 0.984269 | Paralog | 17/17 | 4/53 |
49 | droEre2-51 | mir-276 | tca-miR-276* | 20/20 | scaffold_4784 | + | 16-35 | 10306190-10306272 | 0.992341 | Paralog | 17/17 | 4/53 |
50 | droEre2-51 | mir-276 | der-miR-276b | 22/22 | scaffold_4784 | + | 51-72 | 10306190-10306276 | 0.999007 | Paralog | 17/17 | 4/53 |
51 | droEre2-51 | mir-276 | bmo-miR-276 | 22/22 | scaffold_4784 | + | 15-36 | 10306190-10306272 | 0.991 | Paralog | 17/17 | 4/53 |
52 | droEre2-51 | mir-276 | aga-miR-276-5p | 20/20 | scaffold_4784 | + | 15-34 | 10306190-10306272 | 0.997058 | Paralog | 17/17 | 4/53 |
53 | droEre2-49 | mir-282 | tca-miR-282 | 23/24 | scaffold_4784 | + | 9-32 | 5933731-5933807 | 0.998831 | Paralog | 16/16 | 2/28 |
54 | droEre2-49 | mir-282 | dan-miR-282 | 27/28 | scaffold_4784 | + | 6-32 | 5933731-5933807 | 0.997324 | Paralog | 16/16 | 2/28 |
55 | droEre2-49 | mir-282 | aga-miR-282 | 27/28 | scaffold_4784 | + | 5-32 | 5933731-5933807 | 0.997144 | Paralog | 16/16 | 2/28 |
56 | droEre2-45 | mir-317 | dmo-miR-317 | 23/24 | scaffold_4770 | - | 49-71 | 15683478-15683554 | 0.979086 | Paralog | 18/19 | 2/32 |
57 | droEre2-45 | mir-317 | dps-miR-317 | 22/24 | scaffold_4770 | - | 49-70 | 15683478-15683554 | 0.984359 | Paralog | 18/19 | 2/32 |
58 | droEre2-45 | mir-317 | bmo-miR-317 | 22/22 | scaffold_4770 | - | 49-70 | 15683477-15683556 | 0.982455 | Paralog | 18/19 | 2/32 |
59 | droEre2-45 | mir-317 | der-miR-317 | 24/24 | scaffold_4770 | - | 48-71 | 15683480-15683553 | 0.984827 | Paralog | 18/19 | 2/32 |
60 | droEre2-44 | mir-277 | dsi-miR-277 | 21/23 | scaffold_4770 | - | 49-71 | 15674307-15674382 | 0.997855 | Paralog | 17/17 | 2/32 |
61 | droEre2-42 | mir-318 | der-miR-318 | 22/22 | scaffold_4770 | - | 49-70 | 15383900-15383980 | 0.942421 | Paralog | 12/12 | 2/19 |
62 | droEre2-40 | mir-13 | der-miR-13a | 22/22 | scaffold_4770 | - | 49-70 | 10769401-10769478 | 0.980594 | Paralog | 17/18 | 6/75 |
63 | droEre2-40 | mir-13 | tca-miR-13a | 20/22 | scaffold_4770 | - | 50-70 | 10769401-10769479 | 0.971616 | Paralog | 17/18 | 6/75 |
64 | droEre2-38 | mir-13 | der-miR-13b | 22/22 | scaffold_4770 | - | 49-70 | 10769266-10769345 | 0.872964 | Paralog | 17/18 | 6/75 |
65 | droEre2-38 | mir-13 | ame-miR-13a | 20/21 | scaffold_4770 | - | 50-70 | 10769265-10769346 | 0.814357 | Paralog | 17/18 | 6/75 |
66 | droEre2-36 | mir-iab-4 | der-miR-iab-4-3p | 24/24 | scaffold_4770 | - | 48-71 | 8952409-8952490 | 0.998033 | Paralog | 16/16 | 3/44 |
67 | droEre2-36 | mir-iab-4 | der-miR-iab-4-5p | 22/22 | scaffold_4770 | - | 18-39 | 8952406-8952494 | 0.998849 | Paralog | 16/16 | 3/44 |
68 | droEre2-34 | mir-10 | lmi-miR-10* | 22/22 | scaffold_4770 | - | 49-70 | 2882570-2882644 | 0.992961 | Paralog | 43/59 | 2/124 |
69 | droEre2-29 | mir-iab-4 | dme-miR-iab-4as-3p | 22/22 | scaffold_4770 | + | 51-72 | 8952410-8952491 | 0.99941 | Paralog | 16/16 | 3/44 |
70 | droEre2-29 | mir-iab-4 | dme-miR-iab-4as-5p | 23/23 | scaffold_4770 | + | 14-36 | 8952409-8952492 | 0.998197 | Paralog | 16/16 | 3/44 |
71 | droEre2-26 | mir-11 | der-miR-11 | 21/21 | scaffold_4770 | + | 51-71 | 4217179-4217262 | 0.998754 | Paralog | 13/13 | 2/19 |
72 | droEre2-26 | mir-11 | aga-miR-11 | 22/22 | scaffold_4770 | + | 51-72 | 4217179-4217262 | 0.999189 | Paralog | 13/13 | 2/19 |
73 | droEre2-20 | mir-283 | ame-miR-283 | 20/20 | scaffold_4690 | - | 4-23 | 11632498-11632572 | 0.81261 | Paralog | 16/17 | 2/23 |
74 | droEre2-19 | mir-304 | der-miR-304 | 23/23 | scaffold_4690 | - | 8-30 | 11631477-11631555 | 0.952168 | Paralog | 12/13 | 2/18 |
75 | droEre2-17 | mir-12 | bmo-miR-12 | 22/23 | scaffold_4690 | - | 13-35 | 11630948-11631031 | 0.998041 | Paralog | 18/18 | 2/28 |
76 | droEre2-17 | mir-12 | cap-miR-12 | 21/22 | scaffold_4690 | - | 8-28 | 11630949-11631026 | 0.997427 | Paralog | 18/18 | 2/28 |
77 | droEre2-136 | mir-14 | der-miR-14 | 21/21 | scaffold_4929 | - | 50-70 | 8915907-8915987 | 0.993653 | Paralog | 16/16 | 2/29 |
78 | droEre2-133 | mir-275 | der-miR-275 | 23/23 | scaffold_4929 | + | 50-72 | 16344530-16344611 | 0.991382 | Paralog | 16/16 | 2/25 |
79 | droEre2-13 | mir-13 | der-miR-13b | 22/22 | scaffold_4690 | - | 49-70 | 6132299-6132377 | 0.997995 | Paralog | 17/18 | 6/75 |
80 | droEre2-13 | mir-13 | ame-miR-13a | 20/21 | scaffold_4690 | - | 50-70 | 6132298-6132378 | 0.998492 | Paralog | 17/18 | 6/75 |
81 | droEre2-129 | mir-307 | lmi-miR-307 | 23/23 | scaffold_4929 | + | 50-72 | 8848890-8848965 | 0.930111 | Paralog | 16/17 | 2/26 |
82 | droEre2-129 | mir-307 | der-miR-307 | 20/20 | scaffold_4929 | + | 52-71 | 8848888-8848967 | 0.979812 | Paralog | 16/17 | 2/26 |
83 | droEre2-119 | mir-9 | ame-miR-9b | 23/23 | scaffold_4845 | - | 7-29 | 19768211-19768283 | 0.992343 | Paralog | 41/59 | 5/206 |
84 | droEre2-115 | mir-8 | lmi-miR-8 | 22/23 | scaffold_4845 | - | 49-71 | 13131134-13131212 | 0.93779 | Paralog | 20/23 | 2/35 |
85 | droEre2-113 | mir-311 | der-miR-311b | 22/22 | scaffold_4845 | - | 49-70 | 10618291-10618368 | 0.917552 | Paralog | 6/6 | 5/14 |
86 | droEre2-112 | mir-312 | der-miR-312 | 22/22 | scaffold_4845 | - | 49-70 | 10618154-10618232 | 0.82364 | Paralog | 6/6 | 3/10 |
87 | droEre2-111 | mir-310 | der-miR-310a | 22/22 | scaffold_4845 | - | 47-68 | 10616441-10616514 | 0.981751 | Paralog | 7/8 | 3/15 |
88 | droEre2-110 | mir-309 | aga-miR-309 | 20/22 | scaffold_4845 | - | 49-70 | 9749337-9749417 | 0.99733 | Paralog | 13/14 | 2/30 |
89 | droEre2-109 | mir-5 | der-miR-5 | 23/23 | scaffold_4845 | - | 12-34 | 9748909-9748988 | 0.875616 | Paralog | 12/12 | 2/23 |
90 | droEre2-108 | mir-6 | der-miR-6 | 22/22 | scaffold_4845 | - | 49-70 | 9748477-9748549 | 0.980503 | Paralog | 12/12 | 4/55 |
91 | droEre2-107 | mir-31 | csa-miR-31 | 20/21 | scaffold_4845 | - | 7-27 | 7899204-7899280 | 0.820514 | Paralog | 40/60 | 3/107 |
92 | droEre2-104 | mir-124 | der-miR-124 | 23/23 | scaffold_4845 | - | 49-71 | 6683978-6684058 | 0.93653 | Paralog | 47/65 | 2/135 |
93 | droEre2-104 | mir-124 | mmu-miR-124 | 20/20 | scaffold_4845 | - | 50-69 | 6683976-6684059 | 0.895291 | Paralog | 47/65 | 2/135 |
94 | droEre2-104 | mir-124 | sme-miR-124a | 19/21 | scaffold_4845 | - | 51-69 | 6683975-6684060 | 0.915408 | Paralog | 47/65 | 2/135 |
95 | droEre2-104 | mir-124 | odi-miR-124a | 21/22 | scaffold_4845 | - | 49-70 | 6683978-6684058 | 0.954175 | Paralog | 47/65 | 2/135 |
96 | droEre2-104 | mir-124 | gga-miR-124a | 21/22 | scaffold_4845 | - | 50-70 | 6683976-6684059 | 0.935262 | Paralog | 47/65 | 2/135 |
97 | droEre2-103 | mir-100 | cap-miR-100 | 20/22 | scaffold_4845 | - | 11-32 | 5800038-5800116 | 0.819159 | Paralog | 39/56 | 2/88 |
98 | droEre2-103 | mir-100 | mdo-miR-100 | 20/21 | scaffold_4845 | - | 11-31 | 5800038-5800116 | 0.863865 | Paralog | 39/56 | 2/88 |
99 | droEre2-103 | mir-100 | nve-miR-100 | 20/22 | scaffold_4845 | - | 12-32 | 5800038-5800116 | 0.84992 | Paralog | 39/56 | 2/88 |
100 | droEre2-102 | let-7 | spu-let-7 | 20/22 | scaffold_4845 | - | 11-31 | 5799415-5799492 | 0.99784 | Paralog | 44/65 | 2/337 |
101 | droEre2-10 | mir-33 | der-miR-33 | 19/21 | scaffold_4690 | + | 31-50 | 9551873-9551971 | 0.996606 | Paralog | 34/54 | 3/96 |
Total | 101 record(s). |